Software

I have developed or co-developed a number of software packages for ecology in the statistical programming language R. I work both privately and collaboratively on Github (username ndimhypervol), so please convey any comments on software as Github issues and I’ll be sure to respond.

Lead developer:

Co-developer:

References

Kass, J. M., Vilela, B., Aiello‐Lammens, M. E., Muscarella, R., Merow, C., & Anderson, R. P. (2018). Wallace: A flexible platform for reproducible modeling of species niches and distributions built for community expansion. Methods in Ecology and Evolution, 9(4), 1151-1156. https://doi.org/10.1111/2041-210X.12945

Muscarella, R., Galante, P. J., Soley‐Guardia, M., Boria, R. A., Kass, J. M., Uriarte, M., & Anderson, R. P. (2014). ENM eval: An R package for conducting spatially independent evaluations and estimating optimal model complexity for Maxent ecological niche models. Methods in Ecology and Evolution, 5(11), 1198-1205. https://doi.org/10.1111/2041-210X.12261

Merow, C., Maitner, B. S., Owens, H. L., Kass, J. M., Enquist, B. J., Jetz, W., & Guralnick, R. (2019). Species’ range model metadata standards: RMMS. Global Ecology and Biogeography, 28(12), 1912-1924. https://doi.org/10.1111/geb.12993

Owens, H. L., Merow, C., Maitner, B., Kass, J. M., Barve, V., & Guralnick, R. P. (2020). occCite: Tools for Querying and Managing Large Biodiversity Occurrence Datasets. R package version 0.2.0. https://github.com/hannahlowens/occCite

Merow, C., Galante, P. J., Babich Morrow, C., Kass, J. M., Moore, A., Grisales-Betancur, V., Gerstner, B., Velasquez, J., Anderson, R. P., & Blair, M. E. (2020). maskRangeR: Improving spatial and temporal accuracy of species distribution models. R package version 1.0. https://github.com/cmerow/maskRangeR